Single-cell analysis workflow for the project characterizing submucosal-plexus neurons, carried out by the Marklund Lab. Karolinska Institutet, Stockholm, Sweden.

To provide a thorough evaluation of our sequencing depth and library quality, we performed sequencing saturation analysis on our sequencing samples ... preservation of transcriptome profiles ...

is an interactive R package to work with high-throughput single cell sequencing technologies (i.e scRNA-seq, scVDJ-seq, scATAC-seq, CITE-Seq and Spatial Transcriptomics (ST)). Toolkit for highly ...

However, the binary concept of universal BCSCs co-existing with bulk tumor cells is over-simplified. Through single-cell RNA-sequencing, we found that Neu, PyMT and BRCA1-null mammary tumors each ...